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Intron Name: Anas_platyrhynchos_platyrhynchos_1_95364702_95365028_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

95364702 - 95365028

Intron Length:

327

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAT|GCAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTTGCAGTAGAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACAAAT

U12 Branch Point Sequence:

GTTAGCATAAAA

Flanking Amino Acid:

TDAMYKLVRKFSILNFPLSL

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

1.2

73.4

40.4

Major BPS

69.5

0.48

73.5

28.6

Major PPT

57.2

0.16

1.2

41.3

Minor 5ss

32.6

-2

41.4

Minor BPS

-0.2

2.1

63.66

41.8

Associated Gene:

Gene:

PDZK1

Ensembl Gene ID:

ENSAPLG00000008849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037302

95362308 - 95368466

6159