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Intron Name: Anas_platyrhynchos_platyrhynchos_1_95365222_95365478_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

95365222 - 95365478

Intron Length:

257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTTAACACA

5'SS Class:

weak_major

3'SS Sequence:

TCATGTAATCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

CTTTTCTGATCT

Flanking Amino Acid:

LEQNTGGKNQDVDSKSPAAK

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.3

0.2

1.2

59.8

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

56.7

0.15

1.2

Minor 5ss

37.1

-1.5

2.8

42.8

Minor BPS

61.1

0.43

1.8

80.23

41.8

Associated Gene:

Gene:

PDZK1

Ensembl Gene ID:

ENSAPLG00000008849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019089

95364328 - 95369517

5190