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Intron Name: Anas_platyrhynchos_platyrhynchos_1_95366054_95366453_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

95366054 - 95366453

Intron Length:

400

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAT|GCAGCCTCT

5'SS Class:

weak_major

3'SS Sequence:

TGGAGCTGAAGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

CATTGCTAAAGC

Flanking Amino Acid:

STPLLWLRCHISEGREAGSI

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.3

0.13

1.4

55.6

43.3

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

42.7

-0.4

1.7

39.1

43.6

Minor 5ss

42.7

-0.8

4.3

68.9

42.3

Minor BPS

-0.3

2.3

58.72

46.3

Associated Gene:

Gene:

PDZK1

Ensembl Gene ID:

ENSAPLG00000008849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046899

95363334 - 95368466

5133