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Intron Name: Anas_platyrhynchos_platyrhynchos_1_95398441_95399637_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

95398441 - 95399637

Intron Length:

1197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GTTCTCTTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTCTCTTTGAAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.7

26.7

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

74.7

0.56

75.3

33.4

Minor 5ss

29.9

-2.3

3.2

41.3

45.2

Minor BPS

63.8

0.29

1.5

67.27

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009229

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009599

95396671 - 95403494

6824