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Intron Name: Anas_platyrhynchos_platyrhynchos_1_95563636_95619496_F

Intron Information:

Intron Rank:

150122

Intron Class:

major

Intron Phase:

Intron Coordinates:

95563636 - 95619496

Intron Length:

55861

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACAAAT

U12 Branch Point Sequence:

TGTTGTACAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.1

0.99

0.8

92.6

23.1

Major BPS

69.5

0.48

73.5

28.6

Major PPT

96.8

1.05

0.5

96.1

13.2

Minor 5ss

41.8

-0.9

2.9

57.3

41.2

Minor BPS

43.9

-0.3

2.2

67.38

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030701

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040742

95563299 - 95619801

56503