Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_955898_956728_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

955898 - 956728

Intron Length:

831

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGGTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGTTCAT

U12 Branch Point Sequence:

CTGTCTTGCACT

Flanking Amino Acid:

SISMLGDPAKGVYISKYADC

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

72.4

0.56

1.2

39.9

Major PPT

81.5

0.71

0.9

75.8

38.1

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

51.9

0.14

72.1

45.2

Associated Gene:

Gene:

TASOR2

Ensembl Gene ID:

ENSAPLG00000007418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007716

946048 - 979990

33943