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Intron Name: Anas_platyrhynchos_platyrhynchos_1_95727545_95728373_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

95727545 - 95728373

Intron Length:

829

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTATTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

CTTTTTGTACCC

Flanking Amino Acid:

NQPSTYGVMAGIKPATPEML

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.2

26.4

Major BPS

78.2

0.7

79.9

32.6

Major PPT

78.2

0.63

0.8

77.4

36.6

Minor 5ss

32.1

-2

3.5

46.6

48.7

Minor BPS

47.6

-0.2

2.2

64.58

42.1

Associated Gene:

Gene:

POU1F1

Ensembl Gene ID:

ENSAPLG00000009241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009641

95727361 - 95735376

8016