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Intron Name: Anas_platyrhynchos_platyrhynchos_1_95728488_95728836_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

95728488 - 95728836

Intron Length:

349

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAA|GCAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

GGGTTTTGCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAATAAC

U12 Branch Point Sequence:

ATAACTGTATGT

Flanking Amino Acid:

NIVNSVSTLQSSLTPCLYKF

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

1.1

81.7

31.2

Major BPS

52.4

0.06

1.2

37.3

Major PPT

67.3

0.39

1.1

65.1

45.5

Minor 5ss

28.2

-2.5

3.9

37.7

Minor BPS

40.9

-0.6

2.3

59.46

Associated Gene:

Gene:

POU1F1

Ensembl Gene ID:

ENSAPLG00000009241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009641

95727361 - 95735376

8016