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Intron Name: Anas_platyrhynchos_platyrhynchos_1_95835841_95842024_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

95835841 - 95842024

Intron Length:

6184

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATGG

5'SS Class:

strong_major

3'SS Sequence:

TTCCAAAATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTCCAAAATC

Flanking Amino Acid:

DIVPSFGFDAGLQHQDKSKE

Intron Amino Acid Position:

285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.9

72.5

39.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

65.9

0.36

56.1

42.5

Minor 5ss

37.3

-1.4

47.6

47.9

Minor BPS

62.7

0.38

1.9

79.21

36.3

Associated Gene:

Gene:

VGLL3

Ensembl Gene ID:

ENSAPLG00000009450

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009841

95820677 - 95842068

21392

ENSAPLT00000009844

95820793 - 95842068

21276