Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_95960802_95965919_R

Intron Information:

Intron Rank:

145068

Intron Class:

major

Intron Phase:

Intron Coordinates:

95960802 - 95965919

Intron Length:

5118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGAGA

5'SS Class:

strong_major

3'SS Sequence:

TATGTCATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

ACTTACATAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.6

42.7

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

76.8

0.6

0.9

67.1

43.4

Minor 5ss

30.2

-2.3

3.3

39.5

46.1

Minor BPS

51.6

-0

1.9

59.78

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025448

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018243

95959361 - 95983241

23881