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Intron Name: Anas_platyrhynchos_platyrhynchos_1_96176697_96178361_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

96176697 - 96178361

Intron Length:

1665

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATAG

5'SS Class:

strong_major

3'SS Sequence:

CTGATTTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TTGTGCTGATTT

Flanking Amino Acid:

LLGRYLARHKGTYLTNEAKG

Intron Amino Acid Position:

388

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

68.6

39.1

Major BPS

77.9

0.69

0.8

75.9

Major PPT

74.7

0.56

0.9

69.7

36.6

Minor 5ss

35.9

-1.6

3.3

46.1

49.1

Minor BPS

48.8

-0

2.1

72.44

44.9

Associated Gene:

Gene:

CADM2

Ensembl Gene ID:

ENSAPLG00000009459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009884

96175649 - 96430500

254852