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Intron Name: Anas_platyrhynchos_platyrhynchos_1_96239740_96270892_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

96239740 - 96270892

Intron Length:

31153

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTGAT

5'SS Class:

major

3'SS Sequence:

TTGGATCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTAAAT

U12 Branch Point Sequence:

ATCTGATTAAAT

Flanking Amino Acid:

ILTCESKGKPVPEPVLWTKD

Intron Amino Acid Position:

246

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.1

74.4

36.1

Major BPS

73.5

0.58

79.3

29.4

Major PPT

65.4

0.35

59.3

41.6

Minor 5ss

36.3

-1.5

3.4

49.9

46.4

Minor BPS

50.2

0.08

2.1

72.89

43.5

Associated Gene:

Gene:

CADM2

Ensembl Gene ID:

ENSAPLG00000009459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028217

96177165 - 96430500

253336

ENSAPLT00000009884

96175649 - 96430500

254852