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Intron Name: Anas_platyrhynchos_platyrhynchos_1_96270984_96291303_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

96270984 - 96291303

Intron Length:

20320

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

CTTTTCTTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATCAA

U12 Branch Point Sequence:

TGTATATCAATA

Flanking Amino Acid:

QIAMQVLEIHYTPLVKIISS

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

80.4

Major BPS

70.2

0.5

72.1

Major PPT

83.1

0.74

0.7

31.7

Minor 5ss

40.3

-1.1

2.9

61.3

Minor BPS

48.4

-0.1

1.8

62.3

37.6

Associated Gene:

Gene:

CADM2

Ensembl Gene ID:

ENSAPLG00000009459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009884

96175649 - 96430500

254852

ENSAPLT00000028217

96177165 - 96430500

253336