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Intron Name: Anas_platyrhynchos_platyrhynchos_1_96296012_96298497_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

96296012 - 96298497

Intron Length:

2486

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

GTTTGCTTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGAAAA

U12 Branch Point Sequence:

ATATCAGAAACA

Flanking Amino Acid:

KTSKAFLTVLGVPEKPQITG

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.2

0.97

0.8

88.9

24.9

Major BPS

0.2

1.2

65.3

38.6

Major PPT

70.4

0.46

41.4

Minor 5ss

39.5

-1.2

2.8

48.3

41.8

Minor BPS

45.3

-0.3

2.4

63.87

42.1

Associated Gene:

Gene:

CADM2

Ensembl Gene ID:

ENSAPLG00000009459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028217

96177165 - 96430500

253336

ENSAPLT00000009884

96175649 - 96430500

254852