Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_97279584_97300217_R

Intron Information:

Intron Rank:

132619

Intron Class:

major

Intron Phase:

Intron Coordinates:

97279584 - 97300217

Intron Length:

20634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTGTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

ATGAAATAAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

71.5

40.2

Major BPS

0.3

62.3

30.4

Major PPT

75.2

0.57

1.1

69.2

46.1

Minor 5ss

27.4

-2.6

2.7

31.3

42.4

Minor BPS

40.7

-0.7

50.36

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018596

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019285

97269479 - 97300307

30829