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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_97617815_97642383_F

Intron Information:

Intron Rank:
142269
Intron Class:
major
Intron Phase:
Intron Coordinates:
97617815 - 97642383
Intron Length:
24569

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
ACG|GTACGTAAA
5'SS Class:
major
3'SS Sequence:
TTTCTCCACACAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TCTCCAC
U12 Branch Point Sequence:
TGTTTCTCCACA
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
78.9
0.68
1
74.7
37.2
Major BPS
54.8
0.12
1.3
66.4
39.9
Major PPT
78.2
0.63
0.8
73.3
30.6
Minor 5ss
34.5
-1.8
2.9
42.3
44.6
Minor BPS
55.3
0.16
2
72
40

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000026609
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000017369
97617183 - 97643390
26208