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Intron Name: Anas_platyrhynchos_platyrhynchos_1_9784461_9786438_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9784461 - 9786438

Intron Length:

1978

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGTCT

5'SS Class:

major

3'SS Sequence:

TTCTGAATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TTGTTCTGAATT

Flanking Amino Acid:

PIQWMACENKGYYYEIPSIG

Intron Amino Acid Position:

409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

1.1

66.1

40.1

Major BPS

82.1

0.8

71.6

36.4

Major PPT

74.1

0.54

0.9

71.2

38.6

Minor 5ss

38.4

-1.3

3.5

57.3

46.9

Minor BPS

71.6

0.76

1.4

84.27

36.8

Associated Gene:

Gene:

CACNA2D1

Ensembl Gene ID:

ENSAPLG00000003174

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022965

9440165 - 9841561

401397

ENSAPLT00000021475

9440165 - 9838442

398278

ENSAPLT00000045079

9440165 - 9878311

438147

ENSAPLT00000019885

9440165 - 9838362

398198

ENSAPLT00000043964

9440165 - 9878311

438147

ENSAPLT00000003267

9440165 - 9838495

398331