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Intron Name: Anas_platyrhynchos_platyrhynchos_1_98042096_98046595_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

98042096 - 98046595

Intron Length:

4500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAATCA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTATTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

TGTGTTTTATTT

Flanking Amino Acid:

LHPECITIAEDVSGMPALCR

Intron Amino Acid Position:

576

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

73.8

30.8

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

76.1

0.59

1.1

80.4

36.2

Minor 5ss

37.6

-1.4

3.1

48.6

47.1

Minor BPS

0.2

1.7

71.36

40.7

Associated Gene:

Gene:

GBE1

Ensembl Gene ID:

ENSAPLG00000016424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039193

97948055 - 98110674

162620

ENSAPLT00000035848

97948055 - 98103148

155094

ENSAPLT00000029584

97948055 - 98110674

162620

ENSAPLT00000017142

97948055 - 98109823

161769