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Intron Name: Anas_platyrhynchos_platyrhynchos_1_980562_980637_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
980562 - 980637

Intron Length:
76

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTTTGTAGC

5'SS Class:
major

3'SS Sequence:
TCTCTCTCCCCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGCTCAA

U12 Branch Point Sequence:
CGGTGCTCAACC

Flanking Amino Acid:
APTDLGTESQIFISRTYDAT

Intron Amino Acid Position:
376

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.4
0.6
1.2
70
40.5

Major BPS
70.6
0.51
1.1
71.6
36.4

Major PPT
80.6
0.69
0.7
73
31.9

Minor 5ss
38.5
-1.3
2.4
46.6
41.7

Minor BPS
49.1
-0
2
59.13
45.7

Associated Gene:

Gene:
GDI2

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

980221 - 986907
6687