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Intron Name: Anas_platyrhynchos_platyrhynchos_1_980693_980898_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
980693 - 980898

Intron Length:
206

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAA|GTAAGAGCC

5'SS Class:
major

3'SS Sequence:
CTTTTTCTTCCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTAAAA

U12 Branch Point Sequence:
CCCTGCTGAAGG

Flanking Amino Acid:
ALDLLEPIEQKFVSISDLFA

Intron Amino Acid Position:
357

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.9
0.71
1
69.7
33.2

Major BPS
73.1
0.58
1
79.6
29.1

Major PPT
91.8
0.94
0.6
84.6
30.3

Minor 5ss
33.4
-1.9
3.4
43.5
37.7

Minor BPS
42.6
-0.7
2.2
43.08
48.3

Associated Gene:

Gene:
GDI2

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

980221 - 986907
6687