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Intron Name: Anas_platyrhynchos_platyrhynchos_1_982853_983276_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
982853 - 983276

Intron Length:
424

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGAGAACT

5'SS Class:
strong_major

3'SS Sequence:
TTTATTCTTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGCTCAA

U12 Branch Point Sequence:
ATATGCTCAAAT

Flanking Amino Acid:
GLGELPQGFARLSAIYGGTY

Intron Amino Acid Position:
218

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.8
0.92
0.8
83.3
27.9

Major BPS
70.6
0.51
1.1
71.6
36.4

Major PPT
89.9
0.9
0.7
85.1
29.6

Minor 5ss
30.7
-2.2
2.9
41.1
44.9

Minor BPS
51
0.11
2.1
73.32
42.8

Associated Gene:

Gene:
GDI2

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

980221 - 986907
6687