Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_98569013_98577663_R

Intron Information:

Intron Rank:

148988

Intron Class:

major

Intron Phase:

Intron Coordinates:

98569013 - 98577663

Intron Length:

8651

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGCATC

5'SS Class:

major

3'SS Sequence:

ATACGTCCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTATAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.2

40.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

71.5

0.48

0.9

66.9

39.7

Minor 5ss

46.4

-0.4

2.5

43.6

Minor BPS

0.11

1.9

72.57

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027611

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046229

98567525 - 98578076

10552

ENSAPLT00000038327

98553467 - 98578076

24610