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Intron Name: Anas_platyrhynchos_platyrhynchos_1_986259_986799_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
986259 - 986799

Intron Length:
541

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAT|GTAAGTACG

5'SS Class:
strong_major

3'SS Sequence:
GTTCTCTCCCAAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCGTAT

U12 Branch Point Sequence:
TCTGTGCCAACG

Flanking Amino Acid:
ESASITPLEDLYKRFNLPGT

Intron Amino Acid Position:
30

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.6
0.79
1
77.4
37.4

Major BPS
51.3
0.03
1.5
51.4
46

Major PPT
66.4
0.37
1
64.2
37

Minor 5ss
38.5
-1.3
2.7
48.6
40.2

Minor BPS
38.5
-1
2.4
47.26
46

Associated Gene:

Gene:
GDI2

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

980221 - 986907
6687