Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_9895784_9896367_F

Intron Information:

Intron Rank:

150312

Intron Class:

major

Intron Phase:

Intron Coordinates:

9895784 - 9896367

Intron Length:

584

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTCCA

5'SS Class:

major

3'SS Sequence:

GTGCGTTTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

GCGATGTTACAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

69.7

36.3

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

76.6

0.6

72.8

42.2

Minor 5ss

31.5

-2.1

2.9

38.2

39.5

Minor BPS

38.9

-0.7

2.2

49.63

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036597

9894936 - 9896825

1890