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Intron Name: Anas_platyrhynchos_platyrhynchos_1_9928290_9930011_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9928290 - 9930011

Intron Length:

1722

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGTTG

5'SS Class:

strong_major

3'SS Sequence:

GGTTTGTTTCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAC

U12 Branch Point Sequence:

GTTTGTTTCAAG

Flanking Amino Acid:

EVCDIPLCSEVECMTCNGES

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

72.3

39.7

Major BPS

61.3

0.28

30.6

Major PPT

67.2

0.39

1.2

63.8

46.3

Minor 5ss

40.4

-1.1

3.3

55.5

48.6

Minor BPS

45.4

-0.5

2.3

56.87

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003468

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003585

9927476 - 9947328

19853