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Intron Name: Anas_platyrhynchos_platyrhynchos_1_99540312_99540902_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99540312 - 99540902

Intron Length:

591

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTAATACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTTTCTAATA

Flanking Amino Acid:

QGEEEEDEMEETES*

Intron Amino Acid Position:

1493

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

77.4

30.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

82.8

0.74

0.9

34.1

Minor 5ss

32.3

-2

3.2

41.6

Minor BPS

66.6

0.52

1.6

79.19

30.8

Associated Gene:

Gene:

ROBO1

Ensembl Gene ID:

ENSAPLG00000006648

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026805

99157878 - 99540917

383040

ENSAPLT00000006969

99413497 - 99540917

127421