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Intron Name: Anas_platyrhynchos_platyrhynchos_1_99844594_99856876_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99844594 - 99856876

Intron Length:

12283

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTGCTTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

AGTGTATTGATT

Flanking Amino Acid:

LPHRREGITDEEALVPYSKP

Intron Amino Acid Position:

1190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

77.9

36.8

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

84.3

0.77

0.8

77.4

36.9

Minor 5ss

36.4

-1.5

3.3

46.1

43.6

Minor BPS

49.1

0.01

1.7

66.38

38.5

Associated Gene:

Gene:

ROBO2

Ensembl Gene ID:

ENSAPLG00000007198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039440

99843306 - 100074452

231147

ENSAPLT00000007504

99843306 - 100181763

338458