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Intron Name: Anas_platyrhynchos_platyrhynchos_1_99871108_99874313_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99871108 - 99874313

Intron Length:

3206

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAATGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTGTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

CTGTTCTGATGC

Flanking Amino Acid:

AYQFDIAKQTWHIQSNTQPP

Intron Amino Acid Position:

1063

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

80.3

32.2

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

80.2

0.68

0.9

77.2

37.1

Minor 5ss

38.1

-1.3

3.5

54.6

Minor BPS

44.9

-0.4

54.04

44.2

Associated Gene:

Gene:

ROBO2

Ensembl Gene ID:

ENSAPLG00000007198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019067

99843306 - 99992484

149179

ENSAPLT00000039440

99843306 - 100074452

231147

ENSAPLT00000007504

99843306 - 100181763

338458

ENSAPLT00000031884

99843306 - 99992484

149179

ENSAPLT00000021774

99843306 - 100074452

231147

ENSAPLT00000020165

99843306 - 100074452

231147