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Intron Name: Anas_platyrhynchos_platyrhynchos_1_99935648_99941922_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99935648 - 99941922

Intron Length:

6275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGCTAT

5'SS Class:

major

3'SS Sequence:

CGTTGCTGTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

AAGCCATGAATG

Flanking Amino Acid:

LAKAQLEVTDVLTDRPPPII

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

0.9

72.8

34.5

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

68.3

0.41

65.7

Minor 5ss

40.2

-1.1

3.1

52.2

Minor BPS

45.9

-0.4

1.7

47.13

39.3

Associated Gene:

Gene:

ROBO2

Ensembl Gene ID:

ENSAPLG00000007198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020165

99843306 - 100074452

231147

ENSAPLT00000019067

99843306 - 99992484

149179

ENSAPLT00000039440

99843306 - 100074452

231147

ENSAPLT00000007504

99843306 - 100181763

338458

ENSAPLT00000031884

99843306 - 99992484

149179

ENSAPLT00000021774

99843306 - 100074452

231147