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Intron Name: Anas_platyrhynchos_platyrhynchos_1_99961361_99964767_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99961361 - 99964767

Intron Length:

3407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GTAATGTCAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTTTTTATGT

Flanking Amino Acid:

VEASATLTVRARPVAPPQFV

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

90.4

20.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

61.6

0.26

1.1

54.9

44.4

Minor 5ss

33.2

-1.9

3.4

48.7

47.5

Minor BPS

54.9

0.23

1.9

74.38

43.4

Associated Gene:

Gene:

ROBO2

Ensembl Gene ID:

ENSAPLG00000007198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031884

99843306 - 99992484

149179

ENSAPLT00000021774

99843306 - 100074452

231147

ENSAPLT00000019067

99843306 - 99992484

149179

ENSAPLT00000039440

99843306 - 100074452

231147