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Intron Name: Anas_platyrhynchos_platyrhynchos_20_10006229_10008267_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10006229 - 10008267

Intron Length:

2039

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TGCCCTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TTGATCTCAGTC

Flanking Amino Acid:

AMFREFTQSKKSVLIEHGIR

Intron Amino Acid Position:

1257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.8

78.8

35.5

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

81.6

0.71

0.8

32.5

Minor 5ss

35.5

-1.6

2.8

45.4

42.6

Minor BPS

47.5

-0.2

1.8

58.85

40.6

Associated Gene:

Gene:

ACACA

Ensembl Gene ID:

ENSAPLG00000006678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019744

9947556 - 10049194

101639

ENSAPLT00000039017

9947556 - 10062330

114775

ENSAPLT00000007210

9949008 - 10051639

102632

ENSAPLT00000038991

9948784 - 10062330

113547

ENSAPLT00000036264

9947556 - 10062330

114775

ENSAPLT00000033706

9948784 - 10062330

113547

ENSAPLT00000039117

9947556 - 10064568

117013