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Intron Name: Anas_platyrhynchos_platyrhynchos_20_10030462_10030925_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10030462 - 10030925

Intron Length:

464

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

CTTGTGTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTGAC

U12 Branch Point Sequence:

AGGTTAGTGACA

Flanking Amino Acid:

QLDDPSRVQQAELHTGTLPQ

Intron Amino Acid Position:

770

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

0.8

80.6

33.8

Major BPS

63.6

0.34

1.2

55.1

42.1

Major PPT

81.6

0.71

0.9

72.6

42.4

Minor 5ss

29.7

-2.3

40.4

45.3

Minor BPS

43.3

-0.5

2.2

53.69

38.6

Associated Gene:

Gene:

ACACA

Ensembl Gene ID:

ENSAPLG00000006678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033706

9948784 - 10062330

113547

ENSAPLT00000039117

9947556 - 10064568

117013

ENSAPLT00000019744

9947556 - 10049194

101639

ENSAPLT00000039017

9947556 - 10062330

114775

ENSAPLT00000007210

9949008 - 10051639

102632

ENSAPLT00000038991

9948784 - 10062330

113547

ENSAPLT00000036264

9947556 - 10062330

114775