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Intron Name: Anas_platyrhynchos_platyrhynchos_20_10058077_10059014_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

10058077 - 10059014

Intron Length:

938

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTGCCACGTAAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCTCAG

U12 Branch Point Sequence:

TCTTCTGCCACG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

1.1

76.2

32.9

Major BPS

49.8

-0

1.5

59.3

39.1

Major PPT

53.4

0.08

1.1

52.2

36.2

Minor 5ss

29.3

-2.4

2.9

33.7

41.5

Minor BPS

42.3

-0.7

2.5

54.65

46.9

Associated Gene:

Gene:

ACACA

Ensembl Gene ID:

ENSAPLG00000006678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038991

9948784 - 10062330

113547

ENSAPLT00000036264

9947556 - 10062330

114775

ENSAPLT00000039117

9947556 - 10064568

117013

ENSAPLT00000039017

9947556 - 10062330

114775