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Intron Name: Anas_platyrhynchos_platyrhynchos_20_10066143_10066416_F

Intron Information:

Intron Rank:

59778

Intron Class:

major

Intron Phase:

Intron Coordinates:

10066143 - 10066416

Intron Length:

274

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

CCGTTCCCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TCAGCCTTCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

78.3

32.5

Major BPS

73.8

0.59

0.9

26.8

Major PPT

72.5

0.51

0.8

69.4

31.3

Minor 5ss

35.1

-1.7

2.8

43.9

Minor BPS

61.4

0.44

1.9

76.34

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008887

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041763

10065932 - 10068182

2251

ENSAPLT00000009234

10065932 - 10068649

2718