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Intron Name: Anas_platyrhynchos_platyrhynchos_20_10066498_10067205_F

Intron Information:

Intron Rank:

59779

Intron Class:

major

Intron Phase:

Intron Coordinates:

10066498 - 10067205

Intron Length:

708

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TATCCTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

AGGTTCTTATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

85.1

0.79

0.8

76.9

36.8

Minor 5ss

32.6

-2

3.1

44.2

Minor BPS

59.5

0.28

1.6

65.03

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008887

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041763

10065932 - 10068182

2251

ENSAPLT00000009234

10065932 - 10068649

2718