Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_10074887_10075525_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10074887 - 10075525

Intron Length:

639

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAATACT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

AGCAGTTTGATT

Flanking Amino Acid:

HQSDHTYEIMTSDFPVLDPN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

0.9

79.5

33.4

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

89.7

0.89

0.6

82.1

29.9

Minor 5ss

37.9

-1.4

2.9

49.2

Minor BPS

46.2

-0.2

1.7

57.96

39.5

Associated Gene:

Gene:

TADA2A

Ensembl Gene ID:

ENSAPLG00000008896

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009294

10072294 - 10094619

22326