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Intron Name: Anas_platyrhynchos_platyrhynchos_20_10123130_10123578_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10123130 - 10123578

Intron Length:

449

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

AACGTTATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAA

U12 Branch Point Sequence:

TTTTGCTGACCT

Flanking Amino Acid:

CLLNVDSRSKKEEKPVEELP

Intron Amino Acid Position:

1159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

0.8

88.1

25.2

Major BPS

0.57

1.2

77.7

37.1

Major PPT

71.2

0.48

66.8

Minor 5ss

-0.9

2.8

55.1

35.9

Minor BPS

57.6

0.32

2.2

84.75

41.8

Associated Gene:

Gene:

SYNRG

Ensembl Gene ID:

ENSAPLG00000009643

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030524

10120780 - 10159748

38969

ENSAPLT00000025003

10120780 - 10155596

34817

ENSAPLT00000023464

10120780 - 10155596

34817

ENSAPLT00000034109

10120780 - 10159748

38969