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Intron Name: Anas_platyrhynchos_platyrhynchos_20_10143709_10144537_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10143709 - 10144537

Intron Length:

829

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGAGCT

5'SS Class:

major

3'SS Sequence:

ATTTGCAATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

AGTATATCAATT

Flanking Amino Acid:

AFMPSYPPSQVVKPEDDDFQ

Intron Amino Acid Position:

554

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

1.1

73.7

35.1

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

70.9

0.47

64.1

41.2

Minor 5ss

29.4

-2.4

3.2

40.4

45.3

Minor BPS

47.6

-0.1

1.8

65.44

38.8

Associated Gene:

Gene:

SYNRG

Ensembl Gene ID:

ENSAPLG00000009643

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023464

10120780 - 10155596

34817

ENSAPLT00000010070

10121544 - 10159748

38205

ENSAPLT00000034109

10120780 - 10159748

38969

ENSAPLT00000030524

10120780 - 10159748

38969

ENSAPLT00000025003

10120780 - 10155596

34817