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Intron Name: Anas_platyrhynchos_platyrhynchos_20_10146458_10151143_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10146458 - 10151143

Intron Length:

4686

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTCAT

5'SS Class:

major

3'SS Sequence:

GGAACGCGTTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TTTTTCCTACTA

Flanking Amino Acid:

PTPASHPKKPGVGVFPSQDP

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

1.2

71.7

39.5

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

49.6

-0

1.1

43.6

43.1

Minor 5ss

38.3

-1.3

2.8

50.3

Minor BPS

57.2

0.22

1.9

75.29

36.6

Associated Gene:

Gene:

SYNRG

Ensembl Gene ID:

ENSAPLG00000009643

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023464

10120780 - 10155596

34817