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Intron Name: Anas_platyrhynchos_platyrhynchos_20_10148944_10149676_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10148944 - 10149676

Intron Length:

733

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTCTG

5'SS Class:

strong_major

3'SS Sequence:

GCTGTTTATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

ATATAAATAATT

Flanking Amino Acid:

SASSPNIHKTGSSLEKVLDN

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

1.1

72.7

44.5

Major BPS

74.5

0.61

79.6

29.1

Major PPT

75.9

0.58

73.3

41.1

Minor 5ss

43.4

-0.7

2.9

58.6

45.9

Minor BPS

48.2

-0

71.11

Associated Gene:

Gene:

SYNRG

Ensembl Gene ID:

ENSAPLG00000009643

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034109

10120780 - 10159748

38969

ENSAPLT00000010070

10121544 - 10159748

38205