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Intron Name: Anas_platyrhynchos_platyrhynchos_20_10190452_10194622_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10190452 - 10194622

Intron Length:

4171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGCCG

5'SS Class:

major

3'SS Sequence:

CTCCACCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTTAA

U12 Branch Point Sequence:

GTTTCCTCCACC

Flanking Amino Acid:

EQRAEVERMISEDPWRAAKM

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.3

0.31

1.3

47.1

Major BPS

58.3

0.21

1.1

49.4

37.6

Major PPT

68.6

0.42

0.8

61.6

28.6

Minor 5ss

35.5

-1.6

3.4

48.5

47.2

Minor BPS

61.4

0.34

75.68

40.5

Associated Gene:

Gene:

HNF1B

Ensembl Gene ID:

ENSAPLG00000027870

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021912

10178366 - 10194960

16595

ENSAPLT00000046404

10176515 - 10194960

18446