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Intron Name: Anas_platyrhynchos_platyrhynchos_20_10207409_10207835_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10207409 - 10207835

Intron Length:

427

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGGAAC

U12 Branch Point Sequence:

GTTGTGGGAACT

Flanking Amino Acid:

ATEASKDKDKVKSNAVRALG

Intron Amino Acid Position:

909

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

62.5

42.3

Major BPS

43.8

-0.3

1.5

47.1

44.6

Major PPT

91.5

0.93

0.6

89.8

18.5

Minor 5ss

35.9

-1.6

3.3

47.1

48.3

Minor BPS

40.5

-0.6

2.6

64.64

45.8

Associated Gene:

Gene:

HEATR6

Ensembl Gene ID:

ENSAPLG00000010712

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011234

10205759 - 10220805

15047