Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_10230584_10232252_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10230584 - 10232252

Intron Length:

1669

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACCGAG

5'SS Class:

major

3'SS Sequence:

TCTGTTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTAAC

U12 Branch Point Sequence:

TTGGCCTTAACG

Flanking Amino Acid:

EKDIAAYIKKEFDKKYNPTW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.2

63.2

43.4

Major BPS

64.7

0.37

1.1

67.2

35.2

Major PPT

86.6

0.82

0.7

84.6

30.3

Minor 5ss

41.2

-1

3.3

49.2

Minor BPS

75.7

0.67

1.5

75.11

43.1

Associated Gene:

Gene:

DYNLL2

Ensembl Gene ID:

ENSAPLG00000019910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041073

10230446 - 10232384

1939