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Intron Name: Anas_platyrhynchos_platyrhynchos_20_10275658_10278036_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10275658 - 10278036

Intron Length:

2379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATGA

5'SS Class:

strong_major

3'SS Sequence:

AAAACCTTCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GACTTTTTAAAA

Flanking Amino Acid:

WEEAVKARKKECQFTFEKAI

Intron Amino Acid Position:

386

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

71.1

35.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

62.7

0.29

54.1

40.2

Minor 5ss

36.7

-1.5

3.1

47.8

47.6

Minor BPS

59.1

0.28

1.4

61.92

38.1

Associated Gene:

Gene:

VEZF1

Ensembl Gene ID:

ENSAPLG00000011422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011921

10271300 - 10278855

7556