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Intron Name: Anas_platyrhynchos_platyrhynchos_20_10305915_10306611_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10305915 - 10306611

Intron Length:

697

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTTCA

5'SS Class:

strong_major

3'SS Sequence:

GTTTGCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCAGAT

U12 Branch Point Sequence:

CCGCCTGGGAGC

Flanking Amino Acid:

NDFGFSSILSGDAAPPGTSE

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

79.6

29.3

Major BPS

50.1

1.1

46.4

38.9

Major PPT

80.8

0.69

0.9

73.7

36.9

Minor 5ss

40.6

-1.1

2.7

51.2

45.1

Minor BPS

34.2

-1.2

34.51

35.7

Associated Gene:

Gene:

CUEDC1

Ensembl Gene ID:

ENSAPLG00000026352

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034139

10289898 - 10307138

17241

ENSAPLT00000026074

10302038 - 10311541

9504

ENSAPLT00000012133

10289898 - 10307937

18040