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Intron Name: Anas_platyrhynchos_platyrhynchos_20_10306702_10307371_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10306702 - 10307371

Intron Length:

670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTGAGTCGA

5'SS Class:

major

3'SS Sequence:

TGCTTCCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTCAG

U12 Branch Point Sequence:

TGAGACTCAGCT

Flanking Amino Acid:

FRDKLKHMGKSTRKKLFELA

Intron Amino Acid Position:

296

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.7

0.42

1.1

57.9

42.8

Major BPS

48.2

-0.1

1.6

57.3

41.7

Major PPT

82.1

0.72

0.8

73.3

37.2

Minor 5ss

30.1

-2.3

2.9

41.8

Minor BPS

45.2

-0.2

63.42

45.9

Associated Gene:

Gene:

CUEDC1

Ensembl Gene ID:

ENSAPLG00000026352

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026074

10302038 - 10311541

9504

ENSAPLT00000012133

10289898 - 10307937

18040