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Intron Name: Anas_platyrhynchos_platyrhynchos_20_10307466_10307696_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

10307466 - 10307696

Intron Length:

231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGT|GTATCCTAA

5'SS Class:

minor

3'SS Sequence:

GCAGAAGGTGCAG|G

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TCCTTAG

U12 Branch Point Sequence:

TTTTCCTTAGCA

Flanking Amino Acid:

SKRKHLLKHQVLGTAASTAN

Intron Amino Acid Position:

327

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

48.8

-0

1.3

47.7

39.3

Major BPS

54.9

0.12

1.6

53.6

43.8

Major PPT

49.4

-0

1.1

39.1

43.3

Minor 5ss

73.7

0.8

1.8

72.7

44.5

Minor BPS

83.4

1.04

1.4

91.7

29.2

Associated Gene:

Gene:

CUEDC1

Ensembl Gene ID:

ENSAPLG00000026352

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012133

10289898 - 10307937

18040

ENSAPLT00000026074

10302038 - 10311541

9504