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Intron Name: Anas_platyrhynchos_platyrhynchos_20_10314887_10314965_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
10314887 - 10314965

Intron Length:
79

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTACGGGGG

5'SS Class:
major

3'SS Sequence:
CCTGTCCCCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTGAG

U12 Branch Point Sequence:
CCCCCTTTGAGC

Flanking Amino Acid:
RVQKVGSVFSRTRDLMRMGV

Intron Amino Acid Position:
15

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68
0.43
1.1
50.2
46.5

Major BPS
60.1
0.25
1.6
60.7
45.9

Major PPT
72
0.5
0.8
65.4
30.4

Minor 5ss
28
-2.5
3.6
37.4
47.3

Minor BPS
47.5
-0.2
1.6
50.07
41.5

Associated Gene:

Gene:
MRPS23

Ensembl Gene ID:

Chromosome:
20

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10314843 - 10318828
3986