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Intron Name: Anas_platyrhynchos_platyrhynchos_20_10620258_10626899_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10620258 - 10626899

Intron Length:

6642

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCATATTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TGATCCTGAAAA

Flanking Amino Acid:

TSLATSQHSPELQ*

Intron Amino Acid Position:

2736

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

1.2

76.2

39.9

Major BPS

100

1.24

0.5

100

Major PPT

83.4

0.75

0.8

77.2

35.4

Minor 5ss

31.5

-2.1

2.5

37.7

39.6

Minor BPS

64.5

0.45

1.6

72.09

38.8

Associated Gene:

Gene:

NF1

Ensembl Gene ID:

ENSAPLG00000014612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030748

10620205 - 10696896

76692