Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10627952 - 10628741

Intron Length:

790

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAATATT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTGTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAA

U12 Branch Point Sequence:

TAACATTCAATT

Flanking Amino Acid:

PPQYQTSYLQSFGFNGLWRF

Intron Amino Acid Position:

2663

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

27.5

Major BPS

70.6

0.51

73.3

31.3

Major PPT

81.5

0.71

0.9

77.2

37.1

Minor 5ss

42.7

-0.8

60.1

38.5

Minor BPS

48.7

-0

1.7

65.19

Associated Gene:

Gene:

NF1

Ensembl Gene ID:

ENSAPLG00000014612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021367

10619612 - 10696896

77285

ENSAPLT00000030748

10620205 - 10696896

76692

ENSAPLT00000021283

10619569 - 10696896

77328

ENSAPLT00000028988

10619018 - 10696896

77879

ENSAPLT00000019412

10619018 - 10696896

77879

ENSAPLT00000024564

10619018 - 10696896

77879

ENSAPLT00000038614

10619612 - 10696896

77285

ENSAPLT00000015363

10619569 - 10696896

77328

ENSAPLT00000022917

10619569 - 10696896

77328

ENSAPLT00000037182

10619612 - 10696896

77285

Intron Name: Anas_platyrhynchos_platyrhynchos_20_10627952_10628741_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: